---
description: Compare Justworks Payroll vs Paychex Flex regarding their features, reviews, pricing, specifications, screenshots & more.
image: https://gdm-localsites-assets-gfprod.imgix.net/images/software_advice/og_logo-55146305bbe7b450bea05c18e9be9c9a.png
title: Justworks Payroll vs Paychex Flex Comparison
---

Breadcrumb: [Home](/) > [Payroll Software](/directory/318/payroll-software/software) > [Justworks Payroll \<span\>vs\</span\> Paychex Flex](https://www.softwareadvice.ie/compare/427670/428169/justworks-payroll/vs/paychex-flex)

# Compare Justworks Payroll vs Paychex Flex

Canonical: https://www.softwareadvice.ie/compare/427670/428169/justworks-payroll/vs/paychex-flex

> Detailed comparison between Justworks Payroll and Paychex Flex. Check ratings, reviews, pricing, and features to make the best decision for your business.

-----

## At a Glance

| Metric | Justworks Payroll | Paychex Flex |
| **Overall rating** | 5.0/5 | 4.2/5 |
| **Total Reviews** | 2 | 1786 |
| **Starting Price** | - | - |
| **Free Trial** | No | No |
| **Free Version** | No | No |
| **Deployment** | Cloud, SaaS, Web-based | Cloud, SaaS, Web-based, Mac (Desktop), Windows (Desktop), Android (Mobile), iPhone (Mobile), iPad (Mobile) |
| **Support** | Email/Help Desk, Knowledge Base, Phone Support, 24/7 (Live rep), Chat | Email/Help Desk, Phone Support, 24/7 (Live rep), Chat |
| **Training** | - | In Person, Live Online, Webinars, Documentation |

## Key features

### Justworks Payroll

- Activity Dashboard
- Alerts/Notifications
- Benefits Management
- Check Printing
- Employee Database
- Employee Onboarding
- Employee Profiles
- Multi-State
- Payroll Management
- Payroll Reporting
- Self Service Portal
- Tax Calculation
- Tax Compliance
- Third-Party Integrations
- Time & Attendance
- W-2 Preparation

### Paychex Flex

- Activity Dashboard
- Alerts/Notifications
- Benefits Management
- Biometric Recognition
- Check Printing
- Customisable Templates
- Employee Database
- Employee Onboarding
- Employee Profiles
- Multi-State
- Payment Fraud Prevention
- Payment Links
- Payroll Management
- Payroll Reporting
- Self Service Portal
- Tax Calculation
- Tax Compliance
- Third-Party Integrations
- Time & Attendance
- W-2 Preparation

## Links

- [View Justworks Payroll Profile](https://www.softwareadvice.ie/software/427670/justworks-payroll)
- [View Paychex Flex Profile](https://www.softwareadvice.ie/software/428169/paychex-flex)
- [View Original Comparison](https://www.softwareadvice.ie/compare/427670/428169/justworks-payroll/vs/paychex-flex)

-----

## Structured Data

<script type="application/ld+json">
  {"@context":"https://schema.org","@graph":[{"name":"Justworks Payroll vs Paychex Flex Comparison","description":"Compare Justworks Payroll vs Paychex Flex regarding their features, reviews, pricing, specifications, screenshots & more.","url":"https://www.softwareadvice.ie/compare/427670/428169/justworks-payroll/vs/paychex-flex","about":[{"@id":"https://www.softwareadvice.ie/software/427670/justworks-payroll#software"},{"@id":"https://www.softwareadvice.ie/software/428169/paychex-flex#software"}],"breadcrumb":{"@id":"https://www.softwareadvice.ie/compare/427670/428169/justworks-payroll/vs/paychex-flex#breadcrumblist"},"@type":["WebPage","CollectionPage"],"@id":"https://www.softwareadvice.ie/compare/427670/428169/justworks-payroll/vs/paychex-flex#webpage","isPartOf":{"@id":"https://www.softwareadvice.ie/#website"},"inLanguage":"en-IE","publisher":{"@id":"https://www.softwareadvice.ie/#organization"}},{"name":"Justworks Payroll","description":"Designed for small businesses, Justworks Payroll is a cloud-based software that helps streamline HR processes such as payroll management, contractor payments, setting paid time off (PTO) policies, handling tax forms and more.\n\nJustworks Payroll allows businesses to streamline employee onboarding and offboarding and access a worker's job history summaries. Supervisors can track timecards, manage off-cycle payments and PTO. Additionally, the enterprises can generate year-end W-2 and 1099 tax forms and automate payments and tax calculations. \n\nJustworks Payroll integrates with other applications, such as Quickbooks Online and Justworks Time Tracking, to help manage accounting and tax data and monitor team productivity. Businesses can conduct cash needs forecasting, develop PTO policies, access pay stubs, generate reports and store documents on a unified platform.","image":"https://gdm-catalog-fmapi-prod.imgix.net/ProductScreenshot/06a702d9-cdb0-4cc0-9f2f-b944d16e7f12.png","url":"https://www.softwareadvice.ie/software/427670/justworks-payroll","@type":"SoftwareApplication","@id":"https://www.softwareadvice.ie/software/427670/justworks-payroll#software","applicationCategory":"BusinessApplication","publisher":{"@id":"https://www.softwareadvice.ie/#organization"},"aggregateRating":{"@type":"AggregateRating","ratingValue":5.0,"bestRating":5,"ratingCount":2},"operatingSystem":"Cloud"},{"name":"Paychex Flex","description":"Paychex Flex® is an all-in-one HR platform built to help businesses hire, pay, manage, and retain employees all from a single interface. Designed to grow alongside your organization, Paychex Flex combines intelligent technology with flexible support to simplify the full scope of human resource management.\nAt the core of the platform is a connected suite of payroll, HR, benefits, and workforce management tools. Paychex Flex automates routine administrative tasks from payroll processing and tax management to benefits enrollment and scheduling. The all-in-one solution utilizes AI-enabled features such as intelligent payroll automation, predictive analytics and customizable dashboards, as well as AI-supported recruiting technology.\nEvery Paychex Flex user has complete access to in-platform tools and flexible support options at any time. The result is a platform that adapts to your organization, whether you're managing payroll for a small team or supporting a full HR function across multiple locations.","image":"https://gdm-catalog-fmapi-prod.imgix.net/ProductScreenshot/045cd983-0bb8-4a7e-a610-c0fb543c5d9f.jpeg","url":"https://www.softwareadvice.ie/software/428169/paychex-flex","@type":"SoftwareApplication","@id":"https://www.softwareadvice.ie/software/428169/paychex-flex#software","applicationCategory":"BusinessApplication","publisher":{"@id":"https://www.softwareadvice.ie/#organization"},"aggregateRating":{"@type":"AggregateRating","ratingValue":4.2,"bestRating":5,"ratingCount":1786},"operatingSystem":"Cloud, Apple, Windows, Android, Platform ios, Platform ipad"},{"@type":"BreadcrumbList","itemListElement":[{"name":"Home","position":1,"item":"/","@type":"ListItem"},{"name":"Payroll Software","position":2,"item":"/directory/318/payroll-software/software","@type":"ListItem"},{"name":"Justworks Payroll vs Paychex Flex","position":3,"item":"https://www.softwareadvice.ie/compare/427670/428169/justworks-payroll/vs/paychex-flex","@type":"ListItem"}],"@id":"https://www.softwareadvice.ie/compare/427670/428169/justworks-payroll/vs/paychex-flex#breadcrumblist"}]}
</script>
